Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs13079423 | chr3:100028497 | G/A | 4.46E-5 | 210 | 16.43 | 18.47 | 4.67 | KM Plot |
| KIRP | rs13085791 | chr3:49721798 | C/A | 0.000534 | 214 | 14.53 | 16.93 | 19.53 | KM Plot |
| KIRP | rs13093385 | chr3:49710479 | A/T | 0.000557 | 212 | 14.53 | 16.93 | 19.53 | KM Plot |
| KIRP | rs13098188 | chr3:100031083 | C/T | 4.46E-5 | 210 | 16.43 | 18.47 | 4.67 | KM Plot |
| KIRP | rs13119325 | chr4:76617748 | C/T | 8.0E-5 | 211 | 14.32 | 17.12 | 16.43 | KM Plot |
| KIRP | rs13119532 | chr4:1304505 | G/C | 0.000581 | 212 | 14.97 | 19.35 | 11.12 | KM Plot |
| KIRP | rs13135214 | chr4:76607739 | G/A | 8.0E-5 | 211 | 14.32 | 17.12 | 16.43 | KM Plot |
| KIRP | rs13140869 | chr4:76592946 | C/T | 0.000114 | 209 | 14.32 | 16.98 | 18 | KM Plot |
| KIRP | rs13141390 | chr4:76585975 | C/T | 2.61E-5 | 213 | 14.53 | 17.12 | 14.73 | KM Plot |
| KIRP | rs13146314 | chr4:76621511 | G/A | 0.000145 | 211 | 14.32 | 17.6 | 13.03 | KM Plot |
| KIRP | rs13159114 | chr5:176661808 | T/C | 1.17E-6 | 206 | 9.77 | 20.18 | 16.43 | KM Plot |
| KIRP | rs13161245 | chr5:79944733 | A/G | 0.000105 | 214 | 18.65 | 14.83 | 9.77 | KM Plot |
| KIRP | rs13162425 | chr5:81232447 | T/G | 7.55E-6 | 211 | 16.53 | 16.9 | 6.83 | KM Plot |
| KIRP | rs1317548 | chr10:12245520 | C/T | 7.64E-6 | 214 | 16.53 | 16.68 | 7.3 | KM Plot |
| KIRP | rs13177748 | chr5:176643954 | T/G | 4.92E-7 | 212 | 15.33 | 20.53 | 4.93 | KM Plot |